[Jony]

want to take a current flash site I have along with a few html pages
and images and put it on cd and make it an exe file which when the cd is put in a computer it auto runs and takes over the screen , but not sure how I do this?

[Jake]

You can turn individual flash SWF files into EXE's but HTML is and will always be HTML as far as I can see.
To turn an individual flash file into an EXE, open it as a file (double click the swf) then go to file > create projector
Just type a name and save it.

If you have ever heard of Macromedia Director, then you may know that this is a fairly complicated sibling of flash that is capable of creating desktop-style flash (and much more) and is especially tailored to creating CDs. Of course it comes with a hefty pricetag, so it isn't really suitable for the odd project here and there, but it's worth considering if you're planning on doing this sort of thing regularly.

You can make autorun files yourself. Autorun files tell a computer what files to run when the CD is inserted. So that's free!!

Check this out: http://www.swiftcd.com/faq/autorun.html